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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THYM rs199531 chr17:44830414 T/C LOC644172 chr17:43677491-43679748:- 0.83 8.52 2.34E-13 Box Plot
THYM rs199531 chr17:44830414 T/C LRRC37A4 chr17:43578685-43595516:- -0.44 -7.1 2.24E-10 Box Plot
THYM rs199533 chr17:44828931 G/A LOC644172 chr17:43677491-43679748:- 1.12 12.02 8.89E-21 Box Plot
THYM rs199533 chr17:44828931 G/A LRRC37A4 chr17:43578685-43595516:- -0.6 -9.89 2.82E-16 Box Plot
THYM rs199534 chr17:44824213 T/G LOC644172 chr17:43677491-43679748:- 1.12 12.02 8.89E-21 Box Plot
THYM rs199534 chr17:44824213 T/G LRRC37A4 chr17:43578685-43595516:- -0.6 -9.89 2.82E-16 Box Plot
THYM rs199535 chr17:44822662 A/G LOC644172 chr17:43677491-43679748:- 1.12 12.02 8.89E-21 Box Plot
THYM rs199535 chr17:44822662 A/G LRRC37A4 chr17:43578685-43595516:- -0.6 -9.89 2.82E-16 Box Plot
THYM rs199536 chr17:44820425 T/C LOC644172 chr17:43677491-43679748:- -0.82 -8.24 9.36E-13 Box Plot
THYM rs199536 chr17:44820425 T/C LRRC37A4 chr17:43578685-43595516:- 0.46 7.49 3.6E-11 Box Plot
THYM rs200654439 chr9:84049876 C/A GAGE12D chrX:49306370-49313697:+ 0.51 7.16 1.74E-10 Box Plot
THYM rs201570821 chr17:18269441 C/CATA LOC162632 chr17:16614993-16707819:+ 0.53 7.15 1.77E-10 Box Plot
THYM rs201825860 chr17:44835367 G/GA LOC644172 chr17:43677491-43679748:- 1.09 11.28 3.09E-19 Box Plot
THYM rs201825860 chr17:44835367 G/GA LRRC37A4 chr17:43578685-43595516:- -0.59 -9.38 3.47E-15 Box Plot
THYM rs221839 chr5:169759704 A/G GRLF1 chr19:47421933-47508323:+ 0.65 7.86 6.04E-12 Box Plot